GL1X · GenesisL1 explorer

Ligand · D6J

D6J · (2S)-N-[(4-carbamimidoylphenyl)methyl]-2-[methyl-[(2R)-3-phenyl-2-[(phenylmethyl)sulfonylamino]propanoyl]amino]butanamide

D6J, (2S)-N-[(4-carbamimidoylphenyl)methyl]-2-[methyl-[(2R)-3-phenyl-2-[(phenylmethyl)sulfonylamino]propanoyl]amino]butanamide (C29 H35 N5 O4 S, 549.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every…

Component
D6J
Formula
C29 H35 N5 O4 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

D6J in 2 structures; the first of them:

  • 4UFG · Thrombin in complex with (2R)-2-(benzylsulfonylamino)-N-((1S)-2-((4… · D6J H1249 · binds HIS57, TYR60A, TRP60D, GLU97A, ASN98, LEU99, GLU146, ILE174 and 13 more
  • 4UFG · Thrombin in complex with (2R)-2-(benzylsulfonylamino)-N-((1S)-2-((4… · D6J H1249 · binds HIS57, TYR60A, TRP60D, GLU97A, ASN98, LEU99, GLU146, ILE174 and 13 more

Residues it binds most

GLU 2, GLY 2, CYS 2, SER 2, TRP 2, ALA 2, ASN 2, ASP 2, HIS 2, ILE 2 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • PO4 · Phosphate ion

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