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Ligand · D52

D52 · [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4S)-5-[5-[(1S)-1-azanyl-1,3-diphenyl-propyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-4aH-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] hydrogen phosphate

D52, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4S)-5-[5-[(1S)-1-azanyl-1,3-diphenyl-propyl]-7,8-dimethyl-2,4-bis(oxidanylidene)-4aH-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pe…

Component
D52
Formula
C42 H50 N10 O15 P2
Class
ligand
Structures
2
PDB entries
1

Binding sites

D52 in 2 structures; the first of them:

  • 4UVC · LSD1(KDM1A)-CoREST in complex with 1-Phenyl-Tranylcypromine · D52 A900 · binds ILE284, GLY285, SER286, GLY287, VAL288, SER289, GLY290, LEU307 and 38 more
  • 4UVC · LSD1(KDM1A)-corest in complex with 1-phenyl-tranylcypromine · D52 A900 · binds ILE284, GLY285, SER286, GLY287, VAL288, SER289, GLY290, LEU307 and 38 more

Residues it binds most

VAL 2, GLY 2, ALA 2, LEU 2, SER 2, THR 2, TRP 2, ARG 2, GLU 2, TYR 2 (residue and the binding sites it lines).

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