Ligand · D39
D39 · (2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid
D39, (2~{S})-2-azanyl-3-[[(2~{R})-3-hexadecanoyloxy-2-[(~{Z})-octadec-9-enoyl]oxy-propoxy]-oxidanyl-phosphoryl]oxy-propanoic acid (C40 H76 N O10 P, 762.0 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries).…
- Component
- D39
- Formula
- C40 H76 N O10 P
- Class
- ligand
- Structures
- 3
- PDB entries
- 2
Binding sites
D39 in 3 structures; the first of them:
- 6K7M · Cryo-EM structure of the human P4-type flippase ATP8A1-CDC50 (E2Pi-PL state) · D39 A1304 · binds GLN88, THR96, THR100, THR101, VAL103, PRO104, PHE107, ASN352 and 13 more
- 8OXA · Cryo-EM structure of ATP8B1-CDC50A in E2-Pi conformation with occluded PS · D39 A1203 · binds LEU127, GLN131, ALA140, THR143, THR144, VAL146, PRO147, ASN397 and 19 more
- 6K7M · Cryo-EM structure of the human P4-type flippase ATP8A1-CDC50 (E2PI-pl state) · D39 A1304 · binds GLN88, THR100, THR101, PRO104, PHE107, ASN352, ASN353, ILE357 and 7 more
Residues it binds most
VAL 3, THR 3, ASN 3, LEU 2, SER 3, ILE 3, PRO 3, GLN 3, PHE 3, GLY 2 (residue and the binding sites it lines).
Found with
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