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Ligand · D1J

D1J · 1-(beta-D-glucopyranosyl)-5-(pent-1-yn-1-yl)pyrimidine-2,4(1H,3H)-dione

D1J, 1-(beta-D-glucopyranosyl)-5-(pent-1-yn-1-yl)pyrimidine-2,4(1H,3H)-dione (C15 H20 N2 O7, 340.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
D1J
Formula
C15 H20 N2 O7
Class
ligand
Structures
2
PDB entries
1

Binding sites

D1J in 2 structures; the first of them:

  • 4EKY · Crystal structure of GPb in complex with DK15 · D1J A901 · binds GLY134, GLY135, LEU136, LEU139, ASP283, ASN284, ASP339, THR340 and 13 more
  • 4EKY · Crystal structure of gpb in complex with DK15 · D1J A901 · binds GLY134, GLY135, LEU136, LEU139, ASP283, ASN284, ASP339, THR340 and 13 more

Residues it binds most

GLY 2, THR 2, ALA 2, ASN 2, ASP 2, GLU 2, HIS 2, LEU 2, SER 2, TYR 2 (residue and the binding sites it lines).

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