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Ligand · CVM

CVM · Cymal-4

CVM, Cymal-4 (C22 H40 O11, 480.6 g/mol), in the MolNFT structures on GenesisL1: bound in 20 records (10 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
CVM
Formula
C22 H40 O11
Class
ligand
Structures
20
PDB entries
10

Binding sites

CVM in 20 structures; the first of them:

  • 2WIE · High-resolution structure of the rotor ring from a proton dependent ATP synthase · CVM A102 · binds SER3, ASN4, LEU5, ALA8, ALA9, ILE12, LEU5

Residues it binds most

LEU 226, ALA 202, ILE 180, VAL 146, PHE 144, TYR 122, GLU 76, SER 32, ASN 36, ARG 40 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • DCW · Dicyclohexylurea
  • BME · Beta-mercaptoethanol

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