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Ligand · COY

COY · Co-(adenin-9-yl-pentyl)-cobalamin

COY, Co-(adenin-9-yl-pentyl)-cobalamin (C72 H106 Co N18 O14 P +1, 1537.6 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
COY
Formula
C72 H106 Co N18 O14 P +1
Class
ligand
Structures
6
PDB entries
3

Binding sites

COY in 6 structures; the first of them:

  • 1EEX · Crystal structure of the diol dehydratase-adeninylpentylcobalamin complex from klebsiella… · COY A601 · binds THR172, VAL173, SER202, LEU203, GLU204, GLU205, THR222, SER224 and 39 more
  • 1EGV · Crystal structure of the diol dehydratase-adeninylpentylcobalamin complex from klebsella… · COY A601 · binds THR172, VAL173, SER202, LEU203, GLU204, GLU205, THR222, SER224 and 39 more
  • 3ABS · Crystal structure of ethanolamine ammonia-lyase from Escherichia coli complexed with… · COY A601 · binds ASN193, PRO194, VAL195, ASP197, LEU225, ALA226, HIS227, PHE245 and 34 more
  • 1EEX · Crystal structure of the diol dehydratase-adeninylpentylcobalamin complex from klebsiella… · COY A601 · binds THR172, VAL173, SER202, LEU203, GLU204, GLU205, THR222, SER224 and 39 more
  • 1EGV · Crystal structure of the diol dehydratase-adeninylpentylcobalamin complex from klebsella… · COY A601 · binds THR172, VAL173, SER202, LEU203, GLU204, GLU205, THR222, SER224 and 39 more
  • 3ABS · Crystal structure of ethanolamine ammonia-lyase from escherichia COLI complexed with… · COY A601 · binds ASN193, PRO194, VAL195, ASP197, LEU225, ALA226, HIS227, PHE245 and 34 more

Residues it binds most

SER 12, VAL 12, GLN 12, ALA 12, LEU 12, THR 12, GLU 12, PHE 12, TYR 12, ARG 12 (residue and the binding sites it lines).

Found with

  • K · Potassium ion
  • PGO · S-1,2-propanediol
  • ETA · Ethanolamine
  • SO4 · Sulfate ion
  • GOL · Glycerol

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