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Ligand · CDC

CDC · [2-cytidylate-O'-phosphonyloxyl]-ethyl-trimethyl-ammonium

CDC, [2-cytidylate-O'-phosphonyloxyl]-ethyl-trimethyl-ammonium (C14 H26 N4 O11 P2, 488.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
CDC
Formula
C14 H26 N4 O11 P2
Class
ligand
Structures
2
PDB entries
2

Binding sites

CDC in 2 structures; the first of them:

  • 8GYW · Cryo-EM structure of human CEPT1 complexed with CDP-choline · CDC B503 · binds TYR56, GLU65, TRP72, PRO85, ASN86, ASP133, ALA134, ASP136 and 12 more
  • 8URP · Membrane protein enzyme in state 2 · CDC A1005 · binds TYR16, TYR18, ASP22, SER27, TRP35, PRO48, ASN49, THR52 and 15 more

Residues it binds most

ASP 4, GLY 4, ALA 4, SER 4, GLU 4, TYR 4, ARG 4, ASN 4, GLN 2, LEU 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • PCF · 1,2-diacyl-sn-glycero-3-phoshocholine
  • PCW · 1,2-dioleoyl-sn-glycero-3-phosphocholine

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