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Ligand · C8D

C8D · N-[(cyclopentyloxy)carbonyl]-3-methyl-L-valyl-(4R)-N-{(1R)-3-hydroxy-1-[hydroxy(oxido)boranyl]propyl}-4-(isoquinolin-1-yloxy)-L-prolinamide

C8D, N-[(cyclopentyloxy)carbonyl]-3-methyl-L-valyl-(4R)-N-{(1R)-3-hydroxy-1-[hydroxy(oxido)boranyl]propyl}-4-(isoquinolin-1-yloxy)-L-prolinamide (C29 H40 B N4 O8 -1, 583.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records…

Component
C8D
Formula
C29 H40 B N4 O8 -1
Class
ligand
Structures
2
PDB entries
1

Binding sites

C8D in 2 structures; the first of them:

  • 2XCN · Crystal structure of HCV NS3 protease with a boronate inhibitor · C8D A1181 · binds GLN41, THR42, PHE43, HIS57, ASP81, ARG123, ILE132, LEU135 and 11 more
  • 2XCN · Crystal structure of HCV NS3 protease with a boronate inhibitor · C8D A1181 · binds GLN41, THR42, PHE43, HIS57, ASP81, ARG123, ILE132, LEU135 and 11 more

Residues it binds most

ALA 4, ARG 4, ASP 4, PHE 4, SER 4, CYS 4, GLY 4, HIS 4, ILE 4, LEU 4 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion

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