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Ligand · C6T

C6T · 2'-deoxy-5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]amino}phosphoryl]-3,4-dihydrothymidine

C6T, 2'-deoxy-5'-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]amino}phosphoryl]-3,4-dihydrothymidine (C11 H20 N3 O12 P3, 479.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site…

Component
C6T
Formula
C11 H20 N3 O12 P3
Class
ligand
Structures
2
PDB entries
1

Binding sites

C6T in 2 structures; the first of them:

  • 4RT3 · Ternary complex crystal structure of DNA polymerase Beta with (alpha… · C6T A408 · binds ARG149, GLY179, SER180, ARG183, SER188, GLY189, ASP190, ASP192 and 11 more
  • 4RT3 · Ternary complex crystal structure of DNA polymerase beta with (alpha… · C6T A408 · binds ARG149, GLY179, SER180, ARG183, SER188, GLY189, ASP190, ASP192 and 11 more

Residues it binds most

ASP 2, GLY 2, SER 2, ARG 2, ASN 2, DA 2, DG 2, DOC 2, PHE 2, THR 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • NA · Sodium ion
  • CL · Chloride ion

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