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Ligand · C6Q

C6Q · N-{(1S,2S,3R)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyheptadecyl}-6-phenylhexanamide

C6Q, N-{(1S,2S,3R)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyheptadecyl}-6-phenylhexanamide (C36 H63 N O9, 653.9 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
C6Q
Formula
C36 H63 N O9
Class
ligand
Structures
2
PDB entries
1

Binding sites

C6Q in 2 structures; the first of them:

  • 3GML · Structure of mouse CD1d in complex with C6Ph · C6Q A300 · binds PHE70, TYR73, SER76, PHE77, ARG79, ASP80, ILE81, LEU84 and 19 more
  • 3GML · Structure of mouse CD1D in complex with C6PH · C6Q A300 · binds PHE70, TYR73, SER76, PHE77, ARG79, ASP80, ILE81, LEU84 and 19 more

Residues it binds most

LEU 2, VAL 2, ILE 2, PHE 2, ASP 2, THR 2, TRP 2, ALA 2, ARG 2, GLY 2 (residue and the binding sites it lines).

Found with

  • PLM · Palmitic acid
  • BMA · beta-D-mannopyranose
  • FUC · alpha-L-fucopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • EDO · 1,2-ethanediol

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