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Ligand · C6L

C6L · N-hexanoyl-L-homoserine

C6L, N-hexanoyl-L-homoserine (C10 H19 N O4, 217.3 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with…

Component
C6L
Formula
C10 H19 N O4
Class
ligand
Structures
8
PDB entries
4

Binding sites

C6L in 8 structures; the first of them:

  • 3DHA · An Ultral High Resolution Structure of N-Acyl Homoserine Lactone Hydrolase with the… · C6L A257 · binds SER24, PHE68, PHE72, VAL73, GLN76, ILE77, LEU109, HIS110 and 7 more
  • 3DHB · 1.4 Angstrom Structure of N-Acyl Homoserine Lactone Hydrolase with the Product… · C6L A253 · binds CYS14, LEU16, HIS104, HIS106, PHE107, ASP108, HIS109, HIS169 and 6 more
  • 4G8C · Crystal structures of N-acyl homoserine lactonase AidH E219G mutant complexed with… · C6L A301 · binds GLY32, ASN33, MET77, SER102, LEU103, HIS106, VAL134, PHE138 and 8 more
  • 4ZO3 · AidC, a Dizinc Quorum-Quenching Lactonase, in complex with a product… · C6L A403 · binds ILE60, GLU62, HIS147, PRO148, ASP149, HIS150, TRP178, LEU191 and 9 more
  • 3DHA · An ultral high resolution structure of N-acyl homoserine lactone hydrolase with the… · C6L A257 · binds SER24, PHE68, PHE72, VAL73, GLN76, ILE77, LEU109, HIS110 and 7 more
  • 3DHB · 1.4 ångström structure of N-acyl homoserine lactone hydrolase with the product… · C6L A253 · binds CYS14, LEU16, HIS104, HIS106, PHE107, ASP108, HIS109, HIS169 and 6 more
  • 4G8C · Crystal structures of N-acyl homoserine lactonase aidh E219G mutant complexed with… · C6L A301 · binds GLY32, ASN33, MET77, SER102, LEU103, HIS106, VAL134, PHE138 and 8 more
  • 4ZO3 · Aidc, a dizinc quorum-quenching lactonase, in complex with a product… · C6L A403 · binds ILE60, GLU62, HIS147, PRO148, ASP149, HIS150, TRP178, LEU191 and 9 more

Residues it binds most

HIS 12, PHE 12, LEU 12, ASP 8, GLY 10, ILE 6, MET 6, TYR 8, ALA 8, GLU 6 (residue and the binding sites it lines).

Found with

  • ZN · Zinc ion
  • GOL · Glycerol

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