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Ligand · C5X

C5X · 3-[(2R)-oxiran-2-yl]propyl beta-D-xylopyranoside

C5X, 3-[(2R)-oxiran-2-yl]propyl beta-D-xylopyranoside (C10 H18 O6, 234.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
C5X
Formula
C10 H18 O6
Class
sugar
Structures
2
PDB entries
1

Binding sites

C5X in 2 structures; the first of them:

  • 1RED · Endo-1,4-beta-xylanase II complex with 4,5-epoxypentyl-beta-D-xyloside · C5X B401 · binds SER16, TRP18, ASN44, VAL46, TYR77, TRP79, GLU86, TYR88 and 6 more
  • 1RED · Endo-1,4-beta-xylanase II complex with 4,5-epoxypentyl-beta-D-xyloside · C5X B401 · binds SER16, TRP18, ASN44, VAL46, TYR77, TRP79, GLU86, TYR88 and 6 more

Residues it binds most

TYR 2, GLU 2, SER 2, TRP 2, ASN 2, GLN 2, ILE 2, PRO 2, VAL 2 (residue and the binding sites it lines).

Found with

  • BEZ · Benzoic acid

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