GL1X · GenesisL1 explorer

Ligand · C1Q

C1Q · N-{(1S,2S,3R)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyheptadecyl}-10-phenyldecanamide

C1Q, N-{(1S,2S,3R)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyheptadecyl}-10-phenyldecanamide (C40 H71 N O9, 710.0 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
C1Q
Formula
C40 H71 N O9
Class
ligand
Structures
2
PDB entries
1

Binding sites

C1Q in 2 structures; the first of them:

  • 3GMN · Structure of mouse CD1d in complex with C10Ph · C1Q A300 · binds CYS12, LEU13, GLN14, MET69, PHE70, TYR73, SER76, PHE77 and 21 more
  • 3GMN · Structure of mouse CD1D in complex with C10PH · C1Q A300 · binds CYS12, LEU13, GLN14, MET69, PHE70, TYR73, SER76, PHE77 and 21 more

Residues it binds most

LEU 2, PHE 2, VAL 2, ASP 2, ILE 2, THR 2, TRP 2, ALA 2, ARG 2, CYS 2 (residue and the binding sites it lines).

Found with

  • PLM · Palmitic acid
  • BMA · beta-D-mannopyranose
  • FUC · alpha-L-fucopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • EDO · 1,2-ethanediol

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