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Ligand · C0T

C0T · Calicheamicin T0

C0T, Calicheamicin T0 (C24 H28 N2 O9 S3, 584.7 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
C0T
Formula
C24 H28 N2 O9 S3
Class
ligand
Structures
4
PDB entries
2

Binding sites

C0T in 4 structures; the first of them:

  • 3OTI · Crystal Structure of CalG3, Calicheamicin Glycostyltransferase, TDP and calicheamicin T0… · C0T A378 · binds PRO7, GLY8, GLY10, HIS11, ALA56, PHE60, LEU82, GLN88 and 19 more
  • 3RSC · Crystal Structure of CalG2, Calicheamicin Glycosyltransferase, TDP and calicheamicin T0… · C0T A398 · binds LEU14, ILE58, ALA63, VAL66, PHE67, PRO76, HIS77, MSE79 and 14 more
  • 3OTI · Crystal structure of CALG3, calicheamicin glycostyltransferase, tdp and calicheamicin T0… · C0T A378 · binds PRO7, GLY8, GLY10, HIS11, ALA56, PHE60, LEU82, GLN88 and 19 more
  • 3RSC · Crystal structure of CALG2, calicheamicin glycosyltransferase, tdp and calicheamicin T0… · C0T A398 · binds LEU14, ILE58, ALA63, VAL66, PHE67, PRO76, HIS77, MSE79 and 14 more

Residues it binds most

GLY 4, PHE 8, GLN 4, ALA 8, ASP 8, ILE 8, PRO 8, VAL 8, HIS 8, LEU 8 (residue and the binding sites it lines).

Found with

  • TYD · Thymidine-5'-diphosphate
  • CL · Chloride ion
  • PO4 · Phosphate ion

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