Ligand · BVD
BVD · 5-bromovinyldeoxyuridine
BVD, 5-bromovinyldeoxyuridine (C11 H13 Br N2 O5, 333.1 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…
- Component
- BVD
- Formula
- C11 H13 Br N2 O5
- Class
- ligand
- Structures
- 4
- PDB entries
- 2
Binding sites
BVD in 4 structures; the first of them:
- 1KI8 · Crystal structure of thymidine kinase from herpes simplex virus type I complexed with… · BVD A1 · binds HIS58, GLU83, TRP88, ILE97, ILE100, TYR101, GLN125, MET128 and 8 more
- 2VQS · Structural Studies of Nucleoside Analog and Feedback Inhibitor Binding to Drosophila… · BVD A1210 · binds ILE29, GLU52, TRP57, LEU66, MET69, TYR70, PHE80, GLN81 and 9 more
- 1KI8 · Crystal structure of thymidine kinase from herpes simplex virus type I complexed with… · BVD A1 · binds HIS58, GLU83, TRP88, ILE97, ILE100, TYR101, GLN125, MET128 and 8 more
- 2VQS · Structural studies of nucleoside analog and feedback inhibitor binding to drosophila… · BVD A1210 · binds ILE29, GLU52, TRP57, LEU66, MET69, TYR70, PHE80, GLN81 and 9 more
Residues it binds most
MET 12, TYR 12, ALA 12, ARG 12, GLU 12, ILE 12, PHE 8, SER 8, VAL 8, GLN 12 (residue and the binding sites it lines).
Found with
- SO4 · Sulfate ion
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