GL1X · GenesisL1 explorer

Ligand · BO8

BO8 · (D-alpha-aminopimelylamino)-D-1-ethylboronic acid

BO8, (D-alpha-aminopimelylamino)-D-1-ethylboronic acid (C9 H20 B N2 O6 -1, 263.1 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
BO8
Formula
C9 H20 B N2 O6 -1
Class
ligand
Structures
2
PDB entries
1

Binding sites

BO8 in 2 structures; the first of them:

  • 2XDM · Crystal structure of a complex between Actinomadura R39 DD peptidase and a peptidoglycan… · BO8 B500 · binds ALA48, SER49, LYS52, TRP139, ASP142, TYR147, SER298, ASN300 and 8 more
  • 2XDM · Crystal structure of a complex between actinomadura R39 dd peptidase and a peptidoglycan… · BO8 B500 · binds ALA48, SER49, LYS52, TRP139, ASP142, TYR147, SER298, ASN300 and 8 more

Residues it binds most

SER 4, GLY 4, ALA 4, ARG 4, ASN 4, ASP 4, LEU 4, LYS 4, MET 4, THR 4 (residue and the binding sites it lines).

Found with

  • CO · Cobalt (II) ion
  • SO4 · Sulfate ion
  • MES · 2-(N-morpholino)-ethanesulfonic acid

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.