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Ligand · BNE

BNE · 2-[3-(3-ethyl-1-methyl-2-oxo-azepan-3-yl)-phenoxy]-4-[1-amino-1-(1-methyl-1H-imidizol-5-yl)-ethyl]-benzonitrile

BNE, 2-[3-(3-ethyl-1-methyl-2-oxo-azepan-3-yl)-phenoxy]-4-[1-amino-1-(1-methyl-1H-imidizol-5-yl)-ethyl]-benzonitrile (C28 H33 N5 O2, 471.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site…

Component
BNE
Formula
C28 H33 N5 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

BNE in 2 structures; the first of them:

  • 1MZC · Co-Crystal Structure Of Human Farnesyltransferase With Farnesyldiphosphate and Inhibitor… · BNE B1003 · binds TYR166, LEU596, SER599, TRP602, TRP606, ALA651, ARG702, ASP797 and 6 more
  • 1MZC · Co-crystal structure of human farnesyltransferase with farnesyldiphosphate and inhibitor… · BNE B1003 · binds TYR166, LEU596, SER599, TRP602, TRP606, ALA651, ARG702, ASP797 and 6 more

Residues it binds most

TYR 2, TRP 2, ALA 2, ARG 2, ASP 2, CYS 2, HIS 2, LEU 2, SER 2 (residue and the binding sites it lines).

Found with

  • FPP · Farnesyl diphosphate
  • ZN · Zinc ion
  • FRU · beta-D-fructofuranose
  • GLC · alpha-D-glucopyranose

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