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Ligand · BJD

BJD · N-benzyl-1-{2-chloro-5-[(2-chloro-5-{5-(methylsulfonyl)-1-[3-(morpholin-4-yl)propyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}phenyl) ethynyl]phenyl}methanamine

BJD, N-benzyl-1-{2-chloro-5-[(2-chloro-5-{5-(methylsulfonyl)-1-[3-(morpholin-4-yl)propyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl}phenyl) ethynyl]phenyl}methanamine (C36 H39 Cl2 N5 O3 S, 692.7 g/mol), in the MolNFT structures on…

Component
BJD
Formula
C36 H39 Cl2 N5 O3 S
Class
ligand
Structures
2
PDB entries
2

Binding sites

BJD in 2 structures; the first of them:

  • 5QCE · Crystal structure of human cathepsin-S with bound ligand · BJD A901 · binds GLY23, SER25, GLY62, LYS64, CYS66, ASN67, GLY68, GLY69 and 10 more
  • 5QCF · Crystal structure of human cathepsin-S with bound ligand · BJD A901 · binds PHE70, MET71, THR73, ALA140, ARG141, PHE146, ASN161, VAL162 and 5 more

Residues it binds most

GLY 3, ASN 3, PHE 3, HIS 3, MET 3, THR 3, VAL 3, CYS 2, SER 2, ALA 1 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • GOL · Glycerol

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