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Ligand · BDA

BDA · 4-methylbenzyl-N-bis[daunomycin]

BDA, 4-methylbenzyl-N-bis[daunomycin] (C62 H66 N2 O20 +2, 1159.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
BDA
Formula
C62 H66 N2 O20 +2
Class
ligand
Structures
4
PDB entries
2

Binding sites

BDA in 4 structures; the first of them:

  • 1AGL · Structure of a DNA-bisdaunomycin complex · BDA A7 · binds DT4, DC5, DG6
  • 1AL9 · NMR study of DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3') self-complementary duplex complexed… · BDA A17 · binds DC2, DG3, DT4, DA5, DC6, DG7, DC10, DG11 and 4 more
  • 1AGL · Structure of a DNA-bisdaunomycin complex · BDA A7 · binds DT4, DC5, DG6
  • 1AL9 · NMR study of DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3') self-complementary duplex complexed… · BDA A17 · binds DC2, DG3, DT4, DA5, DC6, DG7, DC10, DG11 and 4 more

Residues it binds most

DC 4, DG 4, DT 4, DA 2 (residue and the binding sites it lines).

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