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Ligand · B2V

B2V · Valine boronic acid

B2V, Valine boronic acid (C4 H12 B N O2, 117.0 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
B2V
Formula
C4 H12 B N O2
Class
ligand
Structures
5
PDB entries
5

Binding sites

B2V in 5 structures; the first of them:

  • 1P03 · Structure analysis of specificity. alpha-lytic protease complexes with analogues of… · B2V P1 · binds CYS42, HIS57, MET192, GLY192A, ARG192B, GLY193, ASP194, SER195 and 6 more
  • 1P10 · Structural plasticity as a determinant of enzyme specificity. creating broadly specific… · B2V P1 · binds HIS57, MET192, GLY192A, ARG192B, GLY193, ASP194, SER195, SER214 and 4 more
  • 2H5D · 0.9A resolution crystal structure of alpha-lytic protease complexed with a transition… · B2V B203 · binds CYS42, HIS57, MET190, GLY191, ARG192, GLY193, ASP194, SER195 and 6 more
  • 2LPR · Structural basis for broad specificity in alpha-lytic protease mutants · B2V P1 · binds HIS57, GLY192A, ARG192B, GLY193, ASP194, SER195, MET213, SER214 and 4 more
  • 3NZI · Substrate induced remodeling of the active site regulates HTRA1 activity · B2V B8 · binds HIS220, ILE323, ASN324, TYR325, GLY326, ASN327, SER328, ASN343 and 5 more

Residues it binds most

GLY 5, SER 5, MET 4, HIS 5, ALA 4, ARG 4, ASP 4, PRO 4, VAL 4, ASN 1 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • MSU · Succinic acid monomethyl ester
  • GOL · Glycerol

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