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Ligand · B2E

B2E · (6-hydroxy-1,3-dimethyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carbonyl)glycine

B2E, (6-hydroxy-1,3-dimethyl-2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carbonyl)glycine (C9 H11 N3 O6, 257.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å…

Component
B2E
Formula
C9 H11 N3 O6
Class
ligand
Structures
2
PDB entries
1

Binding sites

B2E in 2 structures; the first of them:

  • 5OX5 · HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with CCT6, a GSK1278863-related compound · B2E A502 · binds ASP254, ILE256, MET299, ALA301, TYR303, TYR310, HIS313, ASP315 and 8 more
  • 5OX5 · Hif prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with CCT6, a GSK1278863-related compound · B2E A502 · binds ASP254, ILE256, MET299, ALA301, TYR303, TYR310, HIS313, ASP315 and 8 more

Residues it binds most

TYR 2, ALA 2, ASP 2, HIS 2, ILE 2, ARG 2, LEU 2, MET 2, TRP 2, VAL 2 (residue and the binding sites it lines).

Found with

  • BCT · Bicarbonate ion
  • MN · Manganese (II) ion

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