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Ligand · ATF

ATF · Phosphodifluoromethylphosphonic acid-adenylate ester

ATF, Phosphodifluoromethylphosphonic acid-adenylate ester (C11 H16 F2 N5 O12 P3, 541.2 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
ATF
Formula
C11 H16 F2 N5 O12 P3
Class
ligand
Structures
6
PDB entries
3

Binding sites

ATF in 6 structures; the first of them:

  • 1BWF · Escherichia COLI glycerol kinase mutant with bound ATP analog showing substantial domain… · ATF Y601 · binds GLY12, THR13, THR14, SER15, ASP245, TYR265, GLY266, THR267 and 11 more
  • 1DVR · Structure of a mutant adenylate kinase ligated with an ATP-analogue showing domain… · ATF A230 · binds PRO12, PRO13, GLY14, ALA15, GLY16, LYS17, GLY18, THR19 and 14 more
  • 2VR1 · Crystal structure of Biotin carboxylase from E. coli in complex with ATP analog, ADPCF2P. · ATF A1448 · binds LYS116, VAL131, ILE157, LYS159, GLY166, ARG167, MET169, GLU201 and 13 more
  • 1BWF · Escherichia COLI glycerol kinase mutant with bound ATP analog showing substantial domain… · ATF Y601 · binds GLY12, THR13, THR14, SER15, ASP245, TYR265, GLY266, THR267 and 11 more
  • 1DVR · Structure of a mutant adenylate kinase ligated with an ATP-analogue showing domain… · ATF A230 · binds PRO12, PRO13, GLY14, ALA15, GLY16, LYS17, GLY18, THR19 and 14 more
  • 2VR1 · Crystal structure of biotin carboxylase from E. COLI in complex with ATP analog, ADPCF2P. · ATF A1448 · binds LYS116, VAL131, ILE157, LYS159, GLY166, ARG167, MET169, GLU201 and 13 more

Residues it binds most

GLY 10, ALA 8, LYS 6, PRO 4, THR 8, GLN 10, TYR 10, ARG 6, ASN 10, ILE 6 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • CL · Chloride ion
  • GOL · Glycerol

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