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Ligand · APV

APV · 6-(5-amino-5-carboxy-pentanoylamino)-3-hydroxymethyl-7-oxo-4-thia-1-aza-bicyclo[3.2.0]heptane-2-carboxylic acid

APV, 6-(5-amino-5-carboxy-pentanoylamino)-3-hydroxymethyl-7-oxo-4-thia-1-aza-bicyclo[3.2.0]heptane-2-carboxylic acid (C13 H19 N3 O7 S, 361.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding…

Component
APV
Formula
C13 H19 N3 O7 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

APV in 2 structures; the first of them:

  • 1ODN · Isopenicillin N synthase from aspergillus nidulans (oxygen-exposed product from anaerobic… · APV A1324 · binds ARG87, TYR91, CYS104, SER183, VAL185, ILE187, TYR189, PHE211 and 9 more
  • 1ODN · Isopenicillin N synthase from aspergillus nidulans (oxygen-exposed product from anaerobic… · APV A1324 · binds ARG87, TYR91, CYS104, SER183, VAL185, ILE187, TYR189, PHE211 and 9 more

Residues it binds most

HIS 2, LEU 2, PHE 2, SER 2, TYR 2, VAL 2, ARG 2, ASP 2, CYS 2, GLN 2 (residue and the binding sites it lines).

Found with

  • FE2 · Fe (II) ion
  • SO4 · Sulfate ion

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