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Ligand · APD

APD · 3-methylphenylalanine

APD, 3-methylphenylalanine (C10 H13 N O2, 179.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
APD
Formula
C10 H13 N O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

APD in 2 structures; the first of them:

  • 1GMY · Cathepsin B complexed with dipeptidyl nitrile inhibitor · APD A501 · binds GLY27, CYS29, TRP30, GLY73, GLY74, PRO76, ALA173, GLY198 and 4 more
  • 1GMY · Cathepsin B complexed with dipeptidyl nitrile inhibitor · APD A501 · binds GLY27, CYS29, TRP30, GLY73, GLY74, PRO76, ALA173, GLY198 and 4 more

Residues it binds most

GLY 6, ALA 6, GLU 6, CYS 6, HIS 6, PRO 6, TRP 6, PHE 2 (residue and the binding sites it lines).

Found with

  • AEM · 2-aminoethanimidic acid
  • DFA · Diphenylacetic acid

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