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Ligand · AMO

AMO · Aspartyl-adenosine-5'-monophosphate

AMO, Aspartyl-adenosine-5'-monophosphate (C14 H19 N6 O10 P, 462.3 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
AMO
Formula
C14 H19 N6 O10 P
Class
ligand
Structures
7
PDB entries
4

Binding sites

AMO in 7 structures; the first of them:

  • 1C0A · Crystal structure of the E. COLI aspartyl-tRNA synthetase : trnaasp : aspartyl-adenylate… · AMO A831 · binds A676, SER193, GLN195, LYS198, ARG217, ASP224, ARG225, GLN226 and 20 more
  • 1G51 · Aspartyl tRNA synthetase from thermus thermophilus at 2.4 a resolution · AMO A831 · binds GLU177, SER199, GLN201, LYS204, ARG223, GLU225, ASP230, ARG231 and 20 more
  • 1IL2 · Crystal Structure of the E. coli Aspartyl-tRNA Synthetase:Yeast… · AMO A831 · binds A976, GLU171, SER193, GLN195, LYS198, ARG217, ASP224, ARG225 and 20 more
  • 3NEM · Aspartyl-tRNA synthetase complexed with aspartyl adenylate · AMO A439 · binds GLU170, SER190, GLN192, LYS195, ILE212, ARG214, GLU216, ARG222 and 19 more
  • 1C0A · Crystal structure of the E. COLI aspartyl-tRNA synthetase : trnaasp : aspartyl-adenylate… · AMO A831 · binds A676, SER193, GLN195, LYS198, ARG217, ASP224, ARG225, GLN226 and 20 more
  • 1G51 · Aspartyl tRNA synthetase from thermus thermophilus at 2.4 a resolution · AMO A831 · binds GLU177, SER199, GLN201, LYS204, ARG223, GLU225, ASP230, ARG231 and 20 more
  • 1IL2 · Crystal structure of the E. COLI aspartyl-tRNA SYNTHETASE:YEAST… · AMO A831 · binds A976, GLU171, SER193, GLN195, LYS198, ARG217, ASP224, ARG225 and 20 more

Residues it binds most

GLY 11, ARG 11, GLN 11, GLU 11, SER 11, HIS 11, ASP 11, ILE 11, PHE 11, VAL 10 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • AMP · Adenosine monophosphate
  • ATP · Adenosine-5'-triphosphate
  • MG · Magnesium ion

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