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Ligand · AHD

AHD · 4-amino-1-hydroxybutane-1,1-diyldiphosphonate

AHD, 4-amino-1-hydroxybutane-1,1-diyldiphosphonate (C4 H9 N O7 P2 -4, 245.1 g/mol), in the MolNFT structures on GenesisL1: bound in 9 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
AHD
Formula
C4 H9 N O7 P2 -4
Class
ligand
Structures
9
PDB entries
6

Binding sites

AHD in 9 structures; the first of them:

  • 6GGJ · Crystal structure of CotB2 in complex with alendronate · AHD A401 · binds PHE107, ASP110, PHE149, ARG177, ASP180, ILE181, ASN220, SER224 and 4 more
  • 7AO0 · Crystal structure of CotB2 variant F107A in complex with alendronate · AHD A401 · binds ASP110, PHE149, ARG177, ASP180, ILE181, ASN220, SER224, ARG227 and 3 more
  • 7AO1 · Crystal structure of CotB2 variant W288F in complex with alendronate · AHD A401 · binds ASN103, PHE107, ASP110, PHE149, ARG177, ASP180, ILE181, ASN220 and 5 more
  • 6GGJ · Crystal structure of COTB2 in complex with alendronate · AHD A401 · binds PHE107, ASP110, ARG177, ILE181, ASN220, SER224, ARG227, GLU228 and 2 more
  • 7AO0 · Crystal structure of COTB2 variant F107A in complex with alendronate · AHD A401 · binds ASP110, ARG177, ILE181, ASN220, SER224, ARG227, GLU228, ARG294 and 1 more
  • 7AO1 · Crystal structure of COTB2 variant W288F in complex with alendronate · AHD A401 · binds PHE107, ASP110, ARG177, ILE181, ASN220, SER224, ARG227, GLU228 and 2 more
  • 7AO2 · Crystal structure of COTB2 variant W288G in complex with alendronate · AHD A402 · binds PHE107, ASP110, ARG177, ILE181, ASN220, SER224, ARG227, GLU228 and 2 more
  • 7AO3 · Crystal structure of COTB2 variant F149L in complex with alendronate · AHD A401 · binds PHE107, ASP110, ARG177, ILE181, ASN220, SER224, ARG227, GLU228 and 2 more
  • 7OFL · Crystal structure of the sesquiterpene synthase COPU9 from coniophora puteana in complex… · AHD A401 · binds PHE95, ASP98, ARG188, THR191, SER192, ASN234, SER238, LYS241 and 3 more

Residues it binds most

ARG 18, ASP 18, PHE 16, SER 18, ASN 18, GLU 18, TYR 18, ILE 16, LYS 2, THR 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • CL · Chloride ion
  • MPD · (4S)-2-methyl-2,4-pentanediol
  • EDO · 1,2-ethanediol

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