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Ligand · AGI

AGI · 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one

AGI, 5,7-dihydroxy-2-(4-hydroxyphenyl)-4H-chromen-4-one (C15 H10 O5, 270.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
AGI
Formula
C15 H10 O5
Class
ligand
Structures
4
PDB entries
3

Binding sites

AGI in 4 structures; the first of them:

  • 5I2H · Crystal structure of O-methyltransferase family 2 protein Plim_1147 from Planctomyces… · AGI A501 · binds LEU158, LEU162, ARG165, ASN267, HIS270, ASP271, TYR314, LEU318 and 3 more
  • 5UQT · Clostridium difficile Toxin B (TcdB) glucosyltransferase domain co-crystallized with… · AGI B602 · binds ALA439, ASN440, ALA441, GLY444, ARG445, MET448, MET436, ALA439 and 5 more
  • 5UQT · Clostridium difficile toxin B (tcdb) glucosyltransferase domain co- crystallized with… · AGI B602 · binds ALA439, ASN440, ALA441, GLY444, ARG445, MET448, ALA439, ASN440 and 4 more
  • 7D3A · Flavone reductase · AGI A402 · binds GLY146, SER147, LEU178

Residues it binds most

LEU 3, ALA 2, ARG 4, ASN 4, GLY 3, MET 2, TYR 2, ASP 2, HIS 2, THR 2 (residue and the binding sites it lines).

Found with

  • MN · Manganese (II) ion
  • FMN · Flavin mononucleotide
  • EDO · 1,2-ethanediol
  • FMT · Formic acid

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