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Ligand · AG8

AG8 · S-[(2E,6E,10E)-14-(dimethylamino)-3,7,11-trimethyltetradeca-2,6,10-trien-1-yl] trihydrogen thiodiphosphate

AG8, S-[(2E,6E,10E)-14-(dimethylamino)-3,7,11-trimethyltetradeca-2,6,10-trien-1-yl] trihydrogen thiodiphosphate (C19 H37 N O6 P2 S, 469.5 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site…

Component
AG8
Formula
C19 H37 N O6 P2 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

AG8 in 4 structures; the first of them:

  • 3PYA · Crystal structure of ent-copalyl diphosphate synthase from Arabidopsis thaliana in… · AG8 A901 · binds ILE208, GLY209, LYS245, THR260, HIS263, LEU287, VAL323, PHE329 and 13 more
  • 4LIX · Crystal structure of ent-copalyl diphosphate synthase from Arabidopsis thaliana in… · AG8 A901 · binds PRO207, ILE208, GLY209, PHE210, LYS245, THR260, HIS263, LEU287 and 16 more
  • 3PYA · Crystal structure of ent-copalyl diphosphate synthase from arabidopsis thaliana in… · AG8 A901 · binds ILE208, GLY209, LYS245, THR260, HIS263, LEU287, VAL323, PHE329 and 13 more
  • 4LIX · Crystal structure of ent-copalyl diphosphate synthase from arabidopsis thaliana in… · AG8 A901 · binds PRO207, ILE208, GLY209, PHE210, LYS245, THR260, HIS263, LEU287 and 16 more

Residues it binds most

TRP 4, ASP 4, PHE 4, GLY 4, ILE 4, LYS 4, ASN 4, GLN 4, HIS 4, LEU 4 (residue and the binding sites it lines).

Found with

  • GOL · Glycerol
  • PO4 · Phosphate ion
  • 1PE · Pentaethylene glycol

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