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Ligand · A8M

A8M · 5'-[(3-aminopropyl)(methyl)amino]-5'-deoxy-8-methyladenosine

A8M, 5'-[(3-aminopropyl)(methyl)amino]-5'-deoxy-8-methyladenosine (C15 H25 N7 O3, 351.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it…

Component
A8M
Formula
C15 H25 N7 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

A8M in 2 structures; the first of them:

  • 3DZ2 · Human AdoMetDC with 5'-[(3-aminopropyl)methylamino]-5'deoxy-8-methyladenosine · A8M A368 · binds PHE7, GLY9, GLU11, SER66, GLU67, PYR68, CYS82, PHE223 and 11 more
  • 3DZ2 · Human adometdc with 5'-[(3-AMINOPROPYL)METHYLAMINO]-5'DEOXY-8- methyladenosine · A8M A368 · binds PHE7, GLY9, GLU11, SER66, GLU67, CYS82, PHE223, ASN224 and 10 more

Residues it binds most

GLU 2, CYS 2, GLY 2, PHE 2, PRO 2, SER 2, ASN 2, HIS 2, ILE 2, THR 2 (residue and the binding sites it lines).

Found with

  • PUT · 1,4-diaminobutane
  • PYR · Pyruvic acid

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