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Ligand · A3S

A3S · Serine-3'-aminoadenosine

A3S, Serine-3'-aminoadenosine (C13 H19 N7 O5, 353.3 g/mol), in the MolNFT structures on GenesisL1: bound in 26 records (13 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
A3S
Formula
C13 H19 N7 O5
Class
ligand
Structures
26
PDB entries
13

Binding sites

A3S in 26 structures; the first of them:

  • 1TKY · Crystal structure of the editing domain of threonyl-tRNA synthetase complexed with… · A3S A500 · binds HIS73, ALA76, HIS77, ALA93, ILE94, GLY95, TYR104, LYS156 and 9 more
  • 2HL0 · Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus… · A3S A500 · binds ALA19, LEU20, ILE43, SER44, VAL45, TYR79, PRO80, PHE81 and 13 more
  • 2HL1 · Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus… · A3S A500 · binds ALA19, LEU20, ILE43, SER44, VAL45, TYR79, PRO80, PHE81 and 12 more
  • 3PD2 · Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus… · A3S A500 · binds ALA19, LEU20, ILE43, SER44, VAL45, TYR79, PRO80, PHE81 and 13 more
  • 4RR6 · N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA… · A3S A500 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 12 more
  • 4RR7 · N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA… · A3S A201 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 12 more
  • 4RR8 · N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA… · A3S A201 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 13 more
  • 4RR9 · N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum pernix with L-Ser3AA… · A3S A201 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 13 more
  • 4RRF · Editing domain of threonyl-tRNA synthetase from Methanococcus jannaschii with L-Ser3AA · A3S A501 · binds THR23, ILE25, ILE44, ALA45, VAL46, TYR80, PRO81, TYR82 and 12 more
  • 4RRH · K116M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum… · A3S A201 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 13 more
  • 4RRJ · Y115A mutant of N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum… · A3S A500 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 11 more
  • 4RRL · E129A mutant of N-terminal editing domain of threonyl-tRNA synthetase from Aeropyrum… · A3S A500 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 12 more
  • 4RRQ · K121M mutant of N-terminal editing domain of threonyl-tRNA synthetase from Pyrococcus… · A3S A500 · binds ALA19, LEU20, ILE43, SER44, VAL45, TYR79, PRO80, PHE81 and 13 more
  • 1TKY · Crystal structure of the editing domain of threonyl-tRNA synthetase complexed with… · A3S A500 · binds HIS73, ALA76, HIS77, ALA93, ILE94, GLY95, TYR104, LYS156 and 9 more
  • 2HL0 · Crystal structure of the editing domain of threonyl-tRNA synthetase from pyrococcus… · A3S A500 · binds ALA19, LEU20, ILE43, SER44, VAL45, TYR79, PRO80, PHE81 and 13 more
  • 2HL1 · Crystal structure of the editing domain of threonyl-tRNA synthetase from pyrococcus… · A3S A500 · binds ALA19, LEU20, ILE43, SER44, VAL45, TYR79, PRO80, PHE81 and 12 more
  • 3PD2 · Crystal structure of the editing domain of threonyl-tRNA synthetase from pyrococcus… · A3S A500 · binds ALA19, LEU20, ILE43, SER44, VAL45, TYR79, PRO80, PHE81 and 13 more
  • 4RR6 · N-terminal editing domain of threonyl-tRNA synthetase from aeropyrum pernix with L-SER3AA… · A3S A500 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 12 more
  • 4RR7 · N-terminal editing domain of threonyl-tRNA synthetase from aeropyrum pernix with L-SER3AA… · A3S A201 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 12 more
  • 4RR8 · N-terminal editing domain of threonyl-tRNA synthetase from aeropyrum pernix with L-SER3AA… · A3S A201 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 13 more
  • 4RR9 · N-terminal editing domain of threonyl-tRNA synthetase from aeropyrum pernix with L-SER3AA… · A3S A201 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 13 more
  • 4RRF · Editing domain of threonyl-tRNA synthetase from methanococcus jannaschii with L-SER3AA · A3S A501 · binds THR23, ILE25, ILE44, ALA45, VAL46, TYR80, PRO81, TYR82 and 12 more
  • 4RRH · K116M mutant of N-terminal editing domain of threonyl-tRNA synthetase from aeropyrum… · A3S A201 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 13 more
  • 4RRJ · Y115A mutant of N-terminal editing domain of threonyl-tRNA synthetase from aeropyrum… · A3S A500 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 11 more
  • 4RRL · E129A mutant of N-terminal editing domain of threonyl-tRNA synthetase from aeropyrum… · A3S A500 · binds ALA19, LEU20, THR40, THR41, VAL42, TYR73, PRO74, TYR75 and 12 more

Residues it binds most

ALA 42, TYR 42, LEU 40, PRO 42, PHE 40, GLY 42, ILE 28, VAL 40, HIS 36, LYS 36 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • CL · Chloride ion

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