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Ligand · A1H6M

A1H6M · 11,20-Ethanoretinal

A1H6M, 11,20-Ethanoretinal (C22 H30 O, 310.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
A1H6M
Formula
C22 H30 O
Class
ligand
Structures
2
PDB entries
2

Binding sites

A1H6M in 2 structures; the first of them:

  • 9EPP · Cryo-EM Structure of Jumping Spider Rhodopsin-1 bound to a Giq heterotrimer · A1H6M R401 · binds MET99, MET103, TYR126, GLY130, SER131, GLY134, SER199, THR201 and 10 more
  • 9EPQ · Cryo-EM Structure of Jumping Spider Rhodopsin-1 bound to a Giq heterotrimer · A1H6M R401 · binds MET103, GLY130, SER131, SER199, THR201, LEU215, TYR218, ALA219 and 6 more

Residues it binds most

TYR 2, SER 2, LEU 2, GLY 2, MET 2, ALA 2, LYS 2, THR 2, TRP 2, ILE 1 (residue and the binding sites it lines).

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