Ligand · A1D6G
A1D6G · 7-[4-[3-[[(1~{S},2~{R},5~{R},6~{S},7~{S},8~{R},9~{R},11~{R},13~{R},14~{R})-8-[(2~{S},3~{R},4~{S},6~{R})-4-(dimethylamino)-6-methyl-3-oxidanyl-oxan-2-yl]oxy-2-ethyl-9-methoxy-1,5,7,9,11,13-hexamethyl-4,12,16-tris(oxidanylidene)-3,17-dioxa-15-azabicyclo[12.3.0]heptadecan-6-yl]oxycarbonylamino]propoxy]but-1-ynyl]-1-methyl-4-oxidanylidene-quinoline-3-carboxylic acid
A1D6G, 7-[4-[3-[[(1~{S},2~{R},5~{R},6~{S},7~{S},8~{R},9~{R},11~{R},13~{R},14~{R})-8-[(2~{S},3~{R},4~{S},6~{R})-4-(dimethylamino)-6-methyl-3-oxidanyl-oxan-2-yl]oxy-2-ethyl-9-methoxy-1,5,7,9,11,13-hexamethyl-4,12,16-tris(oxidanylidene)-3,17-d…
- Component
- A1D6G
- Formula
- C50 H72 N4 O15
- Class
- ligand
- Structures
- 4
- PDB entries
- 4
Binding sites
A1D6G in 4 structures; the first of them:
- 8Y36 · cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with… · A1D6G A3001 · binds U791, C1809, A2085, A2086, A2089, 2MA2530, G2532, C2613 and 3 more
- 8Y37 · Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190. · A1D6G A3000 · binds U791, C1809, MA62085, A2086, A2089, 2MA2530, G2532, C2613 and 3 more
- 8Y38 · Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with… · A1D6G A3000 · binds U791, C1809, MA62085, A2086, A2089, 2MA2530, G2532, C2613 and 3 more
- 8Y39 · cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with… · A1D6G A3000 · binds U791, C1809, A2085, A2086, A2089, 2MA2530, G2532, C2613 and 3 more
Residues it binds most
C 4, A 4, U 4, 2MA 4, G 4, MA6 2 (residue and the binding sites it lines).
Found with
- MG · Magnesium ion
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