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Ligand · A16

A16 · 4-O-(4,6-dideoxy-4-{[(1S,2S,3S,4R,5S)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranosyl)-beta-D-glucopyranose

A16, 4-O-(4,6-dideoxy-4-{[(1S,2S,3S,4R,5S)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranosyl)-beta-D-glucopyranose (C19 H35 N O13, 485.5 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB…

Component
A16
Formula
C19 H35 N O13
Class
ligand
Structures
1
PDB entries
1

Binding sites

A16 in 1 structure; the first of them:

  • 7U3B · Structure of S. venezuelae GlgX bound to c-di-GMP and acarbose (pH 8.5) · A16 C801 · binds ASP210, ARG212, TRP222, TYR224, HIS271, THR306, GLY307, THR308 and 10 more

Residues it binds most

ASP 8, ASN 8, GLU 8, HIS 8, TYR 8, ARG 8, THR 8, GLY 8, LEU 8, TRP 8 (residue and the binding sites it lines).

Found with

  • C2E · 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar)-3,5,10, 12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3, 2-D:3',2'-J][1,3,7,9,2, 8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)
  • PO4 · Phosphate ion

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