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Ligand · 9VR

9VR · (2S)-2-azanyl-6-[[4-[3-(trifluoromethyl)-1,2-diazirin-3-yl]phenyl]methoxycarbonylamino]hexanoic acid

9VR, (2S)-2-azanyl-6-[[4-[3-(trifluoromethyl)-1,2-diazirin-3-yl]phenyl]methoxycarbonylamino]hexanoic acid (C16 H19 F3 N4 O4, 388.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
9VR
Formula
C16 H19 F3 N4 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

9VR in 2 structures; the first of them:

  • 6ABM · Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with pTmdZLys · 9VR A505 · binds MET276, MET300, ALA302, PRO303, LEU305, ALA306, LEU309, ARG330 and 17 more
  • 6ABM · Crystal structure of methanosarcina mazei PYLRS(Y306A/Y384F) complexed with ptmdzlys · 9VR A505 · binds MET276, MET300, ALA302, PRO303, LEU305, ALA306, LEU309, ARG330 and 17 more

Residues it binds most

ALA 2, LEU 2, MET 2, CYS 2, GLY 2, ILE 2, PHE 2, TRP 2, ARG 2, ASN 2 (residue and the binding sites it lines).

Found with

  • ATP · Adenosine-5'-triphosphate
  • K · Potassium ion
  • MG · Magnesium ion

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