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Ligand · 9VN

9VN · (2~{S})-2-[4-(4,4-dimethylcyclohexen-1-yl)-2-methyl-5-pyridin-4-yl-thiophen-3-yl]-2-[(2-methylpropan-2-yl) oxy]ethanoic acid

9VN, (2~{S})-2-[4-(4,4-dimethylcyclohexen-1-yl)-2-methyl-5-pyridin-4-yl-thiophen-3-yl]-2-[(2-methylpropan-2-yl) oxy]ethanoic acid (C24 H31 N O3 S, 413.6 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries).…

Component
9VN
Formula
C24 H31 N O3 S
Class
ligand
Structures
4
PDB entries
2

Binding sites

9VN in 4 structures; the first of them:

  • 5OI2 · Dissociation of biochemical and antiretroviral activities of Integrase-LEDGF Allosteric… · 9VN A305 · binds GLN95, ALA98, TYR99, LEU102, THR124, THR125, ALA128, ALA129 and 1 more
  • 5OI8 · Dissociation of biochemical and antiretroviral activities of Integrase-LEDGF Allosteric… · 9VN A302 · binds GLN95, ALA98, TYR99, LEU102, ALA124, ALA125, ALA128, ALA129 and 1 more
  • 5OI2 · Dissociation of biochemical and antiretroviral activities of integrase-ledgf allosteric… · 9VN A305 · binds GLN95, LEU102, THR124, THR125, ALA128, ALA129, TRP132
  • 5OI8 · Dissociation of biochemical and antiretroviral activities of integrase-ledgf allosteric… · 9VN A302 · binds GLN95, LEU102, ALA124, ALA125, ALA128, ALA129, TRP132

Residues it binds most

ALA 4, GLN 4, LEU 4, THR 2, TRP 4, TYR 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • SO4 · Sulfate ion

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