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Ligand · 8Z9

8Z9 · Sapienic acid

8Z9, Sapienic acid (C16 H30 O2, 254.4 g/mol), in the MolNFT structures on GenesisL1: bound in 12 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
8Z9
Formula
C16 H30 O2
Class
ligand
Structures
12
PDB entries
6

Binding sites

8Z9 in 12 structures; the first of them:

  • 7SB3 · Structure of OC43 spike in complex with polyclonal Fab1 (Donor 269) · 8Z9 J1410 · binds ILE345, LEU349, MET372, LEU375, MET376, ILE379, ALA381, PHE384 and 13 more
  • 7SB4 · Structure of OC43 spike in complex with polyclonal Fab2 (Donor 1412) · 8Z9 A1412 · binds PHE370, MET372, LEU375, MET376, ILE379, PHE384, ALA391, ALA392 and 11 more
  • 7SBV · Structure of OC43 spike in complex with polyclonal Fab4 (Donor 269) · 8Z9 A1409 · binds ILE345, PHE370, MET372, LEU375, MET376, ILE379, ALA381, PHE384 and 11 more
  • 7SBW · Structure of OC43 spike in complex with polyclonal Fab5 (Donor 1051) · 8Z9 A1405 · binds PHE370, MET372, LEU375, MET376, ILE379, ALA381, PHE384, ALA391 and 14 more
  • 7SBX · Structure of OC43 spike in complex with polyclonal Fab6 (Donor 1051) · 8Z9 J1410 · binds VAL415, ASP416, ASN421, LEU422, GLY423, ILE345, LEU349, PHE370 and 14 more
  • 7SBY · Structure of OC43 spike in complex with polyclonal Fab7 (Donor 269) · 8Z9 A1407 · binds ILE345, LEU349, PHE370, MET372, LEU375, MET376, ILE379, ALA381 and 14 more
  • 7SB3 · Structure of OC43 spike in complex with polyclonal FAB1 (donor 269) · 8Z9 J1410 · binds ILE345, LEU349, MET372, LEU375, MET376, ILE379, ALA381, PHE384 and 13 more
  • 7SB4 · Structure of OC43 spike in complex with polyclonal FAB2 (donor 1412) · 8Z9 A1412 · binds PHE370, MET372, LEU375, MET376, ILE379, PHE384, ALA391, ALA392 and 11 more
  • 7SBV · Structure of OC43 spike in complex with polyclonal FAB4 (donor 269) · 8Z9 A1409 · binds ILE345, PHE370, MET372, LEU375, MET376, ILE379, ALA381, PHE384 and 11 more
  • 7SBW · Structure of OC43 spike in complex with polyclonal FAB5 (donor 1051) · 8Z9 A1405 · binds PHE370, MET372, LEU375, MET376, ILE379, ALA381, PHE384, ALA391 and 14 more
  • 7SBX · Structure of OC43 spike in complex with polyclonal FAB6 (donor 1051) · 8Z9 J1410 · binds VAL415, ASP416, ASN421, LEU422, GLY423, ILE345, LEU349, PHE370 and 14 more
  • 7SBY · Structure of OC43 spike in complex with polyclonal FAB7 (donor 269) · 8Z9 A1407 · binds ILE345, LEU349, PHE370, MET372, LEU375, MET376, ILE379, ALA381 and 14 more

Residues it binds most

LEU 36, ILE 36, ALA 36, PHE 36, MET 36, GLY 36, ASN 36, TYR 36, VAL 32, ASP 30 (residue and the binding sites it lines).

Found with

  • BMA · beta-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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