Ligand · 8EB

8EB · [[(2R,3S,5R)-5-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-selanyl-phosphoryl] dihydrogen phosphate

8EB, [[(2R,3S,5R)-5-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-selanyl-phosphoryl] dihydrogen phosphate (C10 H15 N5 O9 P2 Se, 490.2 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB…

Component: 8EB
Formula: C10 H15 N5 O9 P2 Se
Class: ligand
Structures: 1
PDB entries: 1

Binding sites

8EB in 1 structure; the first of them:

8ILH · The crystal structure of dG(Se-Sp)-DNA:Pol X product binary complex · 8EB B201 · binds GLY38, SER39, ARG42, ASP49, ASP51, ASP100, HIS115, PHE116 and 8 more

Residues it binds most

ASP 1, ARG 1, DC 1, GLY 1, DG 1, HIS 1, LEU 1, PHE 1, SER 1, THR 1 (residue and the binding sites it lines).

Found with

GMS · 2'-deoxyguanosine-5'-monoselenophosphate
MG · Magnesium ion
SO4 · Sulfate ion

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