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Ligand · 8DA

8DA · 8-oxodeoxyadenosine

8DA, 8-oxodeoxyadenosine (C10 H15 N5 O4, 269.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
8DA
Formula
C10 H15 N5 O4
Class
ligand
Structures
2
PDB entries
1

Binding sites

8DA in 2 structures; the first of them:

  • 2A5C · Structure of Avidin in complex with the ligand 8-oxodeoxyadenosine · 8DA A303 · binds ASN12, LEU14, SER16, TYR33, THR35, ALA36, TRP70, PHE72 and 5 more
  • 2A5C · Structure of avidin in complex with the ligand 8-oxodeoxyadenosine · 8DA A303 · binds ASN12, LEU14, SER16, TYR33, THR35, ALA36, TRP70, PHE72 and 5 more

Residues it binds most

ASN 4, LEU 4, PHE 4, THR 4, TRP 4, ALA 4, TYR 4, SER 2 (residue and the binding sites it lines).

Found with

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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