GL1X · GenesisL1 explorer

Ligand · 84T

84T · [(2S,4S,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-2-yl]methoxy-N-[(2S,3R)-4-methyl-2,3-bis(oxidanyl)pentanoyl]phosphonamidic acid

84T, [(2S,4S,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-2-yl]methoxy-N-[(2S,3R)-4-methyl-2,3-bis(oxidanyl)pentanoyl]phosphonamidic acid (C16 H25 N6 O8 P, 460.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB…

Component
84T
Formula
C16 H25 N6 O8 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

84T in 2 structures; the first of them:

  • 3ZGZ · Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and toxic moiety from… · 84T A1862 · binds MET40, LEU41, PRO42, TYR43, HIS49, GLY51, HIS52, ASN55 and 19 more
  • 3ZGZ · Ternary complex of E. COLI leucyl-tRNA synthetase, TRNA(LEU) and toxic moiety from… · 84T A1862 · binds MET40, LEU41, PRO42, TYR43, HIS49, GLY51, HIS52, ASN55 and 19 more

Residues it binds most

GLY 4, HIS 4, TYR 4, MET 4, LYS 4, A 4, ASN 4, ASP 4, GLN 4, GLU 4 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion

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