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Ligand · 7G4

7G4 · ruthenocene

7G4, ruthenocene (C10 H10 Ru, 231.3 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
7G4
Formula
C10 H10 Ru
Class
ligand
Structures
3
PDB entries
2

Binding sites

7G4 in 3 structures; the first of them:

  • 6VNU · X-ray Crystal Structure of Ruthenocenyl-7-Aminocephalosporanic Acid Covalent Acyl-Enzyme… · 7G4 A301 · binds ILE108, GLU121, ALA124, ALA125, TYR129
  • 5TOP · Atomic resolution X-ray crystal structure of a ruthenocene conjugated beta-lactam… · 7G4 B303 · binds ILE108, GLU121, ALA124, ALA125, GLN128, TYR129
  • 6VNU · X-ray crystal structure of ruthenocenyl-7-aminocephalosporanic acid covalent acyl-enzyme… · 7G4 A301 · binds ILE108, GLU121, ALA124, ALA125, TYR129

Residues it binds most

ALA 6, GLN 5, GLU 5, ILE 5, TYR 3, LYS 2, PHE 2, GLY 1, LEU 1 (residue and the binding sites it lines).

Found with

  • K · Potassium ion
  • TDJ · [(1,2,3,4,5-eta)-1-(4-{[carboxy(4-carboxy-5-methylidene-5,6-dihydro-2H-1,3-thiazin-2-yl) methyl]amino}-4-oxobutanoyl)cyclopentadienyl][(1,2,3, 4,5-eta)-cyclopentadienyl]ruthenium
  • JSC · [(1,2,3,4,5-eta)-1-(4-{[carboxy(4-carboxy-5,5-dimethyl-1,3-thiazolidin-2-yl)methyl]amino}-4-oxobutanoyl) cyclopentadienyl][(1,2,3,4,5-eta)-cyclopentadienyl]ruthenium
  • JSE · [(1,2,3,4,5-eta)-1-(4-{[carboxy(4-carboxy-5,5-dimethyl-1,3-thiazolidin-2-yl)methyl]amino}-4-oxobutanoyl) cyclopentadienyl][(1,2,3,4,5-eta)-cyclopentadienyl]ruthenium
  • RU · Ruthenium ion

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