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Ligand · 7DW

7DW · 11-(4-fluorophenyl)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]undecanamide

7DW, 11-(4-fluorophenyl)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]undecanamide (C41 H72 F N O9, 742.0 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with…

Component
7DW
Formula
C41 H72 F N O9
Class
ligand
Structures
2
PDB entries
1

Binding sites

7DW in 2 structures; the first of them:

  • 4Y2D · Crystal structure of the mCD1d/7DW8-5/iNKTCR ternary complex · 7DW A304 · binds CYS12, GLN14, SER28, TRP40, ILE47, PHE70, VAL72, TYR73 and 27 more
  • 4Y2D · Crystal structure of the MCD1D/7DW8-5/INKTCR ternary complex · 7DW A304 · binds CYS12, GLN14, SER28, TRP40, ILE47, PHE70, VAL72, TYR73 and 27 more

Residues it binds most

LEU 4, VAL 4, ASP 4, PHE 4, TRP 4, ILE 4, GLY 4, PRO 4, SER 4, THR 4 (residue and the binding sites it lines).

Found with

  • FUC · alpha-L-fucopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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