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Ligand · 7D1

7D1 · 1,5-anhydro-2-deoxy-D-arabino-hexitol

7D1, 1,5-anhydro-2-deoxy-D-arabino-hexitol (C6 H12 O4, 148.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
7D1
Formula
C6 H12 O4
Class
ligand
Structures
2
PDB entries
2

Binding sites

7D1 in 2 structures; the first of them:

  • 5M17 · Structure of the GH99 endo-alpha-mannanase from bacteroides xylanisolvens in complex with… · 7D1 B1 · binds TYR46, TRP48, TRP126, HIS154, GLU156, TYR195, TYR252, GLU333 and 1 more
  • 5M3W · Structure of the GH99 endo-alpha-mannanase from bacteroides xylanisolvens in complex with… · 7D1 B1 · binds TYR46, TRP126, HIS154, GLU156, TYR195, TYR252, GLU333, GLU336

Residues it binds most

GLU 2, TYR 2, TRP 2, HIS 2 (residue and the binding sites it lines).

Found with

  • MAN · alpha-D-mannopyranose
  • ACT · Acetate ion
  • EDO · 1,2-ethanediol

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