GL1X · GenesisL1 explorer

Ligand · 6YB

6YB · (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(2-carbamimidamidoethyl)amino]-2-azanyl-butanoic acid

6YB, (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(2-carbamimidamidoethyl)amino]-2-azanyl-butanoic acid (C17 H28 N10 O5, 452.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2…

Component
6YB
Formula
C17 H28 N10 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

6YB in 2 structures; the first of them:

  • 5LKJ · Crystal structure of mouse CARM1 in complex with ligand SA684 · 6YB A501 · binds PHE138, TYR150, PHE151, TYR154, GLN160, MET163, MET164, ARG169 and 22 more
  • 5LKJ · Crystal structure of mouse CARM1 in complex with ligand SA684 · 6YB A501 · binds PHE138, TYR150, PHE151, TYR154, GLN160, MET163, MET164, ARG169 and 22 more

Residues it binds most

GLU 8, GLY 8, MET 8, SER 8, PHE 8, TYR 8, VAL 8, ALA 8, ARG 8, CYS 8 (residue and the binding sites it lines).

Found with

  • DXE · 1,2-dimethoxyethane
  • EDO · 1,2-ethanediol
  • P33 · 3,6,9,12,15,18-hexaoxaicosane-1,20-diol
  • PEG · Di(hydroxyethyl)ether

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