Ligand · 6VQ
6VQ · [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-3~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] [[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-3~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl]oxy-oxidanyl-phosphoryl] hydrogen phosphate
6VQ, [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-3~{H}-purin-7-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl]…
- Component
- 6VQ
- Formula
- C22 H34 N10 O19 P4 S2 +2
- Class
- ligand
- Structures
- 3
- PDB entries
- 2
Binding sites
6VQ in 3 structures; the first of them:
- 5KQ4 · Crystal structure of S. pombe Dcp1/Dcp2 in complex with H. sapiens PNRC2 and synthetic… · 6VQ E301 · binds ASN72, TRP43, GLY116, TRP117, LYS118, SER120, SER121, GLY122 and 4 more
- 5KQ4 · Crystal structure of S. pombe DCP1/DCP2 in complex with H. sapiens PNRC2 and synthetic… · 6VQ E301 · binds TRP117, LYS118, SER120, SER121, GLY122, LYS129, ARG167, GLN169 and 1 more
- 6AM0 · Crystal structure of K. lactis EDC1-DCP1-DCP2-EDC3 decapping complex with synthetic cap… · 6VQ A302 · binds TRP49, THR52, ASP53, LYS126, HIS127, ARG132, LYS134, HIS194 and 4 more
Residues it binds most
LYS 6, ARG 6, TRP 6, ASP 4, GLU 4, TYR 4, PHE 4, HIS 2, SER 2, ASN 3 (residue and the binding sites it lines).
Found with
- MG · Magnesium ion
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