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Ligand · 6OV

6OV · 3-cyclohexyl-D-alanyl-N-[(4-carbamimidoylphenyl)methyl]-L-prolinamide

6OV, 3-cyclohexyl-D-alanyl-N-[(4-carbamimidoylphenyl)methyl]-L-prolinamide (C22 H33 N5 O2, 399.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
6OV
Formula
C22 H33 N5 O2
Class
ligand
Structures
2
PDB entries
1

Binding sites

6OV in 2 structures; the first of them:

  • 5JZY · Thrombin in complex with (S)-1-((R)-2-amino-3-cyclohexylpropanoyl)-N-(4-carbamimidoylbenzy… · 6OV H308 · binds HIS57, TYR60A, TRP60D, GLU97A, ASN98, LEU99, ILE174, ASP189 and 11 more
  • 5JZY · Thrombin in complex with (S)-1-((R)-2-amino-3-cyclohexylpropanoyl)-N… · 6OV H308 · binds HIS57, TYR60A, TRP60D, GLU97A, ASN98, LEU99, ILE174, ASP189 and 11 more

Residues it binds most

GLY 2, CYS 2, GLU 2, SER 2, TRP 2, ALA 2, ASN 2, ASP 2, HIS 2, ILE 2 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • PO4 · Phosphate ion
  • DMS · Dimethyl sulfoxide

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