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Ligand · 6L0

6L0 · (8E)-6,17,28-trihydroxy-1,6,12,17,23,28-hexaazacyclotritriacont-8-ene-2,5,13,16,24,27-hexone

6L0, (8E)-6,17,28-trihydroxy-1,6,12,17,23,28-hexaazacyclotritriacont-8-ene-2,5,13,16,24,27-hexone (C27 H46 N6 O9, 598.7 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (5 PDB entries). Every binding site with its residues…

Component
6L0
Formula
C27 H46 N6 O9
Class
ligand
Structures
6
PDB entries
5

Binding sites

6L0 in 6 structures; the first of them:

  • 5JJ5 · Crystal structure of iron uptake ABC transporter substrate-binding protein PiaA from… · 6L0 A402 · binds TRP63, ASN83, TYR84, TYR133, TRP158, MET213, TRP223, TYR225 and 9 more
  • 6Z8A · Outer membrane FoxA in complex with nocardamine · 6L0 A904 · binds VAL210, TYR216, TYR218, VAL229, SER243, GLY244, THR245, PHE246 and 10 more
  • 8XF7 · High-resolution structure of the siderophore periplasmic binding protein FtsB from… · 6L0 A401 · binds SER62, THR63, TYR81, THR119, TYR137, TYR193, TYR198, PHE200 and 7 more
  • 8XFA · Structure of the siderophore periplasmic binding protein FtsB mutant Y137A from… · 6L0 A401 · binds SER62, THR63, TYR81, THR119, ALA137, TYR193, TYR198, PHE200 and 7 more
  • 8XFI · High-resolution structure of the siderophore periplasmic binding protein FtsB from… · 6L0 A401 · binds SER62, THR63, TYR81, THR119, TYR137, TYR193, TYR198, PHE200 and 7 more
  • 6Z8A · Outer membrane foxa in complex with nocardamine · 6L0 A904 · binds VAL210, TYR218, GLY244, THR245, PHE246, HIS374, GLY375, GLY376 and 6 more

Residues it binds most

TYR 8, THR 8, PHE 8, GLY 6, TRP 6, SER 7, ARG 6, ASP 2, ALA 3, VAL 2 (residue and the binding sites it lines).

Found with

  • FE · Fe (III) ion
  • GOL · Glycerol
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • DMS · Dimethyl sulfoxide
  • NA · Sodium ion
  • ZN · Zinc ion
  • EDO · 1,2-ethanediol

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