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Ligand · 6D5

6D5 · (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(3-azidopropyl)amino]-2-azanyl-butanoic acid

6D5, (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(3-azidopropyl)amino]-2-azanyl-butanoic acid (C17 H26 N10 O5, 450.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1…

Component
6D5
Formula
C17 H26 N10 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

6D5 in 2 structures; the first of them:

  • 5ISA · Crystal structure of mouse CARM1 in complex with inhibitor SA0401 · 6D5 C501 · binds PHE138, TYR150, PHE151, TYR154, GLN160, MET163, MET164, ARG169 and 21 more
  • 5ISA · Crystal structure of mouse CARM1 in complex with inhibitor SA0401 · 6D5 C501 · binds PHE138, TYR150, PHE151, TYR154, GLN160, MET163, MET164, ARG169 and 21 more

Residues it binds most

GLU 8, GLY 8, MET 8, SER 8, TYR 8, PHE 8, VAL 8, ALA 8, ARG 8, CYS 8 (residue and the binding sites it lines).

Found with

  • DXE · 1,2-dimethoxyethane
  • M2M · 1-methoxy-2-(2-methoxyethoxy)ethane
  • NA · Sodium ion
  • EDO · 1,2-ethanediol
  • PEG · Di(hydroxyethyl)ether
  • PG4 · Tetraethylene glycol

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