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Ligand · 62X

62X · 5'-{[(3S)-3-amino-3-carboxypropyl][3-(dimethylamino) propyl]amino}-5'-deoxyadenosine

62X, 5'-{[(3S)-3-amino-3-carboxypropyl][3-(dimethylamino) propyl]amino}-5'-deoxyadenosine (C19 H32 N8 O5, 452.5 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within…

Component
62X
Formula
C19 H32 N8 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

62X in 2 structures; the first of them:

  • 5HI7 · Co-crystal structure of human SMYD3 with an aza-SAH compound · 62X A507 · binds ARG14, GLY15, ASN16, TYR124, GLU130, ASN132, CYS180, ASN181 and 11 more
  • 5HI7 · Co-crystal structure of human SMYD3 with an aza-sah compound · 62X A507 · binds ARG14, GLY15, ASN16, TYR124, GLU130, ASN132, CYS180, ASN181 and 11 more

Residues it binds most

ASN 2, TYR 2, GLU 2, LEU 2, PHE 2, SER 2, ARG 2, CYS 2, GLY 2, HIS 2 (residue and the binding sites it lines).

Found with

  • MG · Magnesium ion
  • ZN · Zinc ion
  • DMS · Dimethyl sulfoxide

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