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Ligand · 62B

62B · Lefamulin

62B, Lefamulin (C28 H45 N O5 S, 507.7 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
62B
Formula
C28 H45 N O5 S
Class
ligand
Structures
2
PDB entries
1

Binding sites

62B in 2 structures; the first of them:

  • 5HL7 · The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex… · 62B X3003 · binds G2088, A2089, C2090, A2478, C2479, A2530, U2531, G2532 and 2 more
  • 5HL7 · The crystal structure of the large ribosomal subunit of staphylococcus aureus in complex… · 62B X3003 · binds G2088, A2089, C2090, A2478, C2479, A2530, U2531, G2532 and 2 more

Residues it binds most

A 2, U 2, C 2, G 2 (residue and the binding sites it lines).

Found with

  • SPD · Spermidine
  • MG · Magnesium ion
  • MN · Manganese (II) ion
  • EOH · Ethanol
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid
  • MPD · (4S)-2-methyl-2,4-pentanediol

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