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Ligand · 5Y8

5Y8 · 8-[2-azanyl-3-chloranyl-5-(1-methylindazol-5-yl)pyridin-4-yl]-2,8-diazaspiro[4.5]decan-1-one

5Y8, 8-[2-azanyl-3-chloranyl-5-(1-methylindazol-5-yl)pyridin-4-yl]-2,8-diazaspiro[4.5]decan-1-one (C21 H23 Cl N6 O, 410.9 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues…

Component
5Y8
Formula
C21 H23 Cl N6 O
Class
ligand
Structures
1
PDB entries
1

Binding sites

5Y8 in 1 structure; the first of them:

  • 5HBJ · CDK8-CYCC IN COMPLEX WITH 8-[2-Amino-3-chloro-5-(1-methyl-1H-indazol-5-yl)-pyridin-4-yl]-2… · 5Y8 A401 · binds VAL27, GLY28, TYR32, VAL35, ALA50, LYS52, GLU66, ILE79 and 12 more

Residues it binds most

ALA 1, ASP 1, TYR 1, VAL 1, ARG 1, ASN 1, GLU 1, GLY 1, HIS 1, ILE 1 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • FMT · Formic acid

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